Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNTNKFLLIPYLLWMVIFIIVPVVLLIYFSFLDINGHFSFTNYQQIFTT-KYLKMFAYSILYAALITIITLAISYPAAYYITRS-K-FQNILLMIMIIPTWINLLLKTYAFIGLLSHDGVINQFFHLFNLPSFNLLFTTGAFLVVASYIYIPFMILPIFNSMKAIPNNLLQASSDLGASPFYTFRKVIMPLTKEGVMTGIQVTFIPSLSLFMITRLIAGNKVINIGTAIEEQFLTIQNYGMGSTIAIFLIVFMAFILIITKSSNGRG |
| 3D31 Chain:C ((44-283)) | -----------LLLVLFLFIFLTLSNMIFEQITE-----DFSGLVKAAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPLESY----IQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYY-PMVGPTLIYDRFI-SYGLSASRPIAVLLILVTLSIFLVIR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272767 for 1840 contacts (-148.2/contact) +
2D Compatibility (PS) -23985 + (NN) 1948 + (LL) 604
1D Compatibility (HY) -20800 + (ID) 2150
Total energy: -317150.0 ( -172.36 by residue)
QMean score : 0.308
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