Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDL--PIVGKPTSYKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTI-KDEMQPFYKQLNMKGYFYDF-DSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQ---KKHPKVLILMGV-PGSYLVATDKSYIGDLVKIAGGENVIKVKDRQYISSNTENLLNINPDIILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK |
2R79 Chain:A ((1-267)) | -------------------------------LPQRWVSAGGSLSEWVVALGGESKLVGVDTTS-QHPQALKQLPSVGYQRQLAAEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVPQRAEAAELDYRQRLRRQADWIAAAQKSQPAPGVLLVIGNAGGQLLVAGRNTGGDWVLNRAGARNLATH--EGYKPISVEALAALDPVAVVIADRSLEGD--AARAALLKQNPGLAPTRAARDGRLLVLDPTLLVGGLGPRLPDGLAALSAAFYPSA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111406 for 2135 contacts (-52.2/contact) +
2D Compatibility (PS) -27922 + (NN) -20292 + (LL) 3356
1D Compatibility (HY) -6000 + (ID) 2200
Total energy: -164464.0 ( -77.03 by residue)
QMean score : 0.551
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