Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRMKRFLTIVQILLVVIIIIFGYKIVQTYIEDKQERANYEKLQQKFQMLMSKHQEHVRPQFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFEREHRRKGSIFMDFRNELKNLNHNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEFDNKYG-KYQLQVFSAYKTTTKDNYIRT-DFENDQDYQQFLDETKRKSVINSDVNVTVKDKIMTLSTCEDAYSETTKRIVVVAKIIKVS |
3PSQ Chain:A ((21-206)) | -------------------------------------------------------KKGVQFDDLLAINSDVMAWLTVKGTHIDYPIVQGENNLEYINKSVEGEYSLSGSVFLDYRNKVTFEDKYSLIYAHHMAGNVMFGELPNFRKKSFFNKHKEFSIETKTKQKLKINIFACIQTDAFDSLLFNPIDVDISSKNEFLNHIKQKSVQYREILTTNESRFVALSTCEDMT--TDGRIIVIGQIE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51643 for 1434 contacts (-36.0/contact) +
2D Compatibility (PS) -19278 + (NN) -2995 + (LL) 6964
1D Compatibility (HY) -15200 + (ID) 3000
Total energy: -85152.0 ( -59.38 by residue)
QMean score : 0.539
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