Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVR |
| 2L1N Chain:A ((1-120)) | MGITITDELLWAILKDELSDAEANALVWQALGYVWDEAQS--------CWKTDLVAPEWRQDYPEPPDFIASR---------------------PATVKLTRSIPAPYKQLLKEELGFAGYSINELVPRKTRRATMTNWLLAYRRSQQD---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17393 for 803 contacts (21.7/contact) +
2D Compatibility (PS) -12252 + (NN) -1323 + (LL) 3068
1D Compatibility (HY) -2800 + (ID) 650
Total energy: 3436.0 ( 4.28 by residue)
QMean score : 0.201
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