Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
2LFW Chain:A ((84-145))
-----------EAVARARLAR-MTPLSRQALLLTAMEGFSPEDAAYLIEVDTSEVETLVTEALAEIEKQTRALE------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LFW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19345 for 381 contacts (-50.8/contact) +
2D Compatibility (PS) -6380 + (NN) 2230 + (LL) 4404
1D Compatibility (HY) -400 + (ID) 600
Total energy: -20091.0 ( -52.73 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_2LFW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LFW-query.scw
PDB file :
Tito_Scwrl_2LFW.pdb
: