Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKAINIALDGPAAAGKSTIAKRVASELSMIYVDTGAMYRALTYKYLKLNKTEDFAKLVDQTTLDLTYKADKGQCVILDNEDVTDFLRNNDVTQHVSYVASKEPVRSFAVKKQKELAAEKGIVMDGRDIGTVVLPDADLKVYMIASVEERAERRYKDNQLRGIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTGKSIEEVTDEILAMVSQIK
2H92 Chain:B ((3-218))
--AINIALDGPAAAGKSTIAKRVASELSMIYVDTGAMYRALTYKYLKLNKTEDFAKLVDQTTLDLTYKADKGQCVILDNEDVTDFLRNNDVTQHVSYVASKEPVRSFAVKKQKELAAEKGIVMDGRDIGTVVLPDADLKVYMIASVEERAERRYKDNQLRGIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTGKSIEEVTDEILAMVSQI-
General information:
TITO was launched using:
RESULT:
Template:
2H92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80737 for 1742 contacts (-46.3/contact) +
2D Compatibility (PS) -23640 + (NN) -10389 + (LL) 336
1D Compatibility (HY) -28000 + (ID) 10800
Total energy: -153230.0 ( -87.96 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_2H92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H92-query.scw
PDB file :
Tito_Scwrl_2H92.pdb
: