Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGTAEVPEELYEDMEDAIDGCPTDSIKIADESFDGDALKFE
1WTF Chain:C ((1-81))
-PKYTIVDKETCIACGACGAAAPDIYDYDEDGIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADEPFDGDPNKFE
General information:
TITO was launched using:
RESULT:
Template:
1WTF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52638 for 626 contacts (-84.1/contact) +
2D Compatibility (PS) -8965 + (NN) -6825 + (LL) 208
1D Compatibility (HY) -8400 + (ID) 3050
Total energy: -79670.0 ( -127.27 by residue)
QMean score : 0.681
(partial model without unconserved sides chains):
PDB file :
Tito_1WTF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WTF-query.scw
PDB file :
Tito_Scwrl_1WTF.pdb
: