Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINY-DDNGGHFHIRSVD---TNNDEAQLILQTMLVSLQTIEEEYNENIRLNYK
2G0I Chain:A ((35-142))
MIQATFIRR-KGILESVELTGHA-SGEYGFDIVCAAVSTLSMNLVNALEVLADCTVSLQMDEFDGGYMKIDLSYITNKSDEKVQLLFEAFLLGITNLAENSPEFVTAKI-
General information:
TITO was launched using:
RESULT:
Template:
2G0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54517 for 733 contacts (-74.4/contact) +
2D Compatibility (PS) -11277 + (NN) -4158 + (LL) -88
1D Compatibility (HY) -8400 + (ID) 1450
Total energy: -79890.0 ( -108.99 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_2G0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G0I-query.scw
PDB file :
Tito_Scwrl_2G0I.pdb
: