Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYN-QRVLIIDTDAHHGDGTQWSFYADNHVTTYSIH--ETGKFLFPGSGHYTERGEDIGYGHTVNVP----LEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDI--HYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ |
| 2VQV Chain:B ((158-338)) | ---------------------------------------------------------------------------------------------------------------------------------------HHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNF-FPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFG---YLTKQLM-GLAGGRIVLALEGGYDLTAIC----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110286 for 1364 contacts (-80.9/contact) +
2D Compatibility (PS) -18618 + (NN) -10446 + (LL) 14788
1D Compatibility (HY) -13200 + (ID) 3100
Total energy: -140862.0 ( -103.27 by residue)
QMean score : 0.391
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