Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKKKMLAATLSVGLIAPLASPIQESRANTNIENIGDGAEVIKRTEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFSDVKGSGYELTKRMIWPFQYNIGLTTK-DPNVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGG--NGSFNYSKTISYTQKSYVSEVDKQ-NSKSVKWGVKANEFVT----PDGKKSAHDRY---LFVQSPNGPTGSAREYFAPDNQLPPLVQSGFNPSFITTLSHEKGSSDTSEFEISYGRNLDITYATLFPRTGIY-AERKHNAFVNRNFVVRYEVNWKTHEIKVKGHN |
3B07 Chain:E ((26-299)) | --------------------------------------VTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINS--GFVKPNPNDYDFSK-LYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNGNTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFL-AGRQSSAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDL-YQICW--NGFYWAGANYKNFKTRTFKSTYEIDWENHKVKL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42938 for 1839 contacts (-23.3/contact) +
2D Compatibility (PS) -28225 + (NN) -13700 + (LL) 2748
1D Compatibility (HY) -22400 + (ID) 4550
Total energy: -109065.0 ( -59.31 by residue)
QMean score : 0.370
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