Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADDDTSIGVVPIENSIEGTINIVADALAQQDVFAHGEIRLDINFALYGNGTDSISDIKKVYSIAPAISQTTNYIHQHQFDYDYVDSTIQSLTKIENGVAAIAPLGSGEAYGFTPIDTHIEDYPHNVTRFLVIKNQQQFDQNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAITTDIKKVIAILETLDFKVEMIGAFN |
2F1F Chain:A ((12-66)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NESGALSRVIGLFSQRGYNIESLTVAPTDD-PTLSRMTIQTVGDEK-VLEQIEKQLH------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27161 for 292 contacts (-93.0/contact) +
2D Compatibility (PS) -5799 + (NN) -294 + (LL) 13920
1D Compatibility (HY) -800 + (ID) 450
Total energy: -20584.0 ( -70.49 by residue)
QMean score : 0.431
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