Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------MKKFFFIGLLVFVVFFTAA---TIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIKRGNQFRVKY---DGDNDILINIVDKTLKISDK-RSK------TRGYAI-DMNPFHENKKTLTI----------EMPDKMIKRLNLSSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDAL-DSKT--NNSSTYISKSNIKNSNIKVVIGTLQIDKSQIK----QSIFLNDHGD-------IEFKNMPSKVDAKASTKQGDIRFKYDSKPEDTI-------------LKLN-PGTGDSVVK-NKTFTNGKVGKSDNVLEFYTIDGNIKVE |
4QHW Chain:A ((2-401)) | QPQQVVVGVSGNGYVTRQQDGARITQRGVTHWTNPKSIVSIYFYLHQPTTADLSLYAKGHSEIKVSYGKKGFKVNLQSNDFTKVPVGSIDIRQAGYVRIDLQGVSKSGEGFGEIKQLIADNVTGKSNYVKDFSDYWGRRGPSVHLGYALPEGDTEWFYNEIT-VPKEGETMHSYYMAAGFGEGYFGMQYNSPTERRILFSVWSPFDTQNPKEIPDDQ--KIKLLRQGKDVHIGEFGNEGSGGQSYLKYPWKAGNTYKFLMQIRPDGNGNTTYTAYFYATDEKEWKLIASFLRPKTNTWYKRPHSFLENFSPEQGYLSREVFFGNQWARSKEGKWSRLTDATFTHDATASAQVRLDYQGGNTKDNRFYLKMGGFFNESVPMGTKFYCKPTGK-EPEIDWEALKQL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 56244 for 1709 contacts (32.9/contact) +
2D Compatibility (PS) -29703 + (NN) -5019 + (LL) 868
1D Compatibility (HY) -4800 + (ID) 2400
Total energy: 15190.0 ( 8.89 by residue)
QMean score : 0.263
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