Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPTFSSIIFLFFKLKYYAIVTILVTMIIMYLSNFATVGLFLTLRKYTTDPAILLPLYILSFSSVSLLATYLVRISLKKFKKSYLSLNKTYMIIISFVLFATFAFFYIYSTNTSSNGDSLIPYALVFIGLIIFISVVILIMSLFTLKEMKYKRNQEEIETYYEYTLKIEAINNEMRKFRHDYVNILTTLSEYIRED-------DMIGLRAYFNKNIVPMKDNLQMNAIKLNGIENLKVR-------------EIKGLITAKILRAQEMNIPISIEIPDEV-SSINLNMIDLSRSIGIILDNAIEASTEID-DPIIRVAFIESENSVTFIVMNKCADD-IPRIHELFQESFSTKGEGRGLGLSTLKEIADNADNVLLDTII--ENGFFIQKVEIINN |
| 2C2A Chain:A ((22-249)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSN-HLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2C2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -66114 for 1338 contacts (-49.4/contact) +
2D Compatibility (PS) -20991 + (NN) -2105 + (LL) 16928
1D Compatibility (HY) -6000 + (ID) 1600
Total energy: -79882.0 ( -59.70 by residue)
QMean score : 0.448
|
|
|