Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTLLASSLAVGLGIVAGNAGHEAHASEADLNKASLAQMAQSNDQTLNQKPIEAGAYNYTFDYEGFTYHFESDGTHFAWNYHATGANGANMSAQAPATNNVEPSAVQANQVQSQEVEAPQNAQTQQPQASTSNNSQVTATPTESKASEGSSVNVNAHLKQIAQRESGGNIHAVNP--TSGAAGKYQFLQ-ST-WDSV---APAKYKGVSPANA--PESVQDAAAVKLYNTGGAGHWVTA |
| 1YRO Chain:A ((18-105)) | ------------------------------------------------------------------------------------------------------------------------------------------------------YQGISLLEWACVLFHTSGYDTQAVVNDNGSTEYGLFQISDRFWCKSSEFPESENICGISCDKLLDDELDDDIACAKKILAIKGIDYWK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9090 for 555 contacts (16.4/contact) +
2D Compatibility (PS) -8419 + (NN) -4752 + (LL) 8320
1D Compatibility (HY) 400 + (ID) 650
Total energy: 3989.0 ( 7.19 by residue)
QMean score : 0.252
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