Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDKNQLAKYKQDHLCEYEKIMSNNEKEALEEKVASLDLDFIAKLYNDLYINKKTIDDVSAVSEVKYDIKSQMSDDEIKRLEEQGLQAIKEGQFAVLLMAGGQGTRLGYKGPKGSFEI---EGVSLFELQANQLKTLN------HQSGHTIQWYIMTSDINHEETLAYFEAHSYFGYDQEAIHFFKQDNIVALSEEGKLILNQQGRIMETPNGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPLFAGFTVEHDYDITSKTIQ-PKPGESVGRLVNVDCKDTVLEYSELDPEVANQ--------FNNANIGIHAFKLGFILNAVN---RELPYHLAIKNLKQLDENFGVI--EQPT-LKFELFYFDIFTYGTSFVTLQVPREEEFSPLKNKE---GKDSVATATEDLRRMGLI
1JV1 Chain:B ((85-428))---------------------------------------------------------------------------DQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFVVYEVLREDEFSPLKNADSQNGKDNPTTARHALMSL---


General information:
TITO was launched using:
RESULT:

Template: 1JV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125142 for 2489 contacts (-50.3/contact) +
2D Compatibility (PS) -34931 + (NN) -17786 + (LL) 6032
1D Compatibility (HY) -29600 + (ID) 6300
Total energy: -207727.0 ( -83.46 by residue)
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_1JV1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JV1-query.scw
PDB file : Tito_Scwrl_1JV1.pdb: