Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLYFAEIKDILQKAQEDIVLEQALTVQQFEDLLFERYPQINNKKFQVAVNEEFVQKSDFIQPNDTVALIPPVSGG
2QIE Chain:G ((1-77))
MKVLYFAEIKDILQKAQEDIVLEQALTVQQFEDLLFERYPQINNKKFQVAVNEEFVQKSDFIQPNDTVALIPPVSGG
General information:
TITO was launched using:
RESULT:
Template:
2QIE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51249 for 480 contacts (-106.8/contact) +
2D Compatibility (PS) -8647 + (NN) -1644 + (LL) 0
1D Compatibility (HY) -12000 + (ID) 3850
Total energy: -77390.0 ( -161.23 by residue)
QMean score : 0.717
(partial model without unconserved sides chains):
PDB file :
Tito_2QIE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QIE-query.scw
PDB file :
Tito_Scwrl_2QIE.pdb
: