Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKVYFNHDGGVDDLVSLFLLLQ-MENVQLIGVSTIGADCYLEPSLSASVKIINRFSNED----IQVAPSYERGKNPFPKEWRMHAFFMDALPILNEP--------VKHVASNVSDKEAFEDIIQTLKRQSEKVTLLFTGPLTDLAKALQK-DSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDPEAVKIVFDS-DIEIDMVALESTNQVPLTLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFITNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGPSQGKTFECKDGRKINVINHVDNNAFFDYITALAKKVN |
| 3EPX Chain:B ((14-279)) | --KNVVLDHDGNLDDFVAMVLLASNTEKVRLIGALCTDADCFVENGFNVTGKIMCLMHNNMNLPLFPIGKSAATAVNPFPKEWRCLAKNMDDMPILNIPENVELWDKIKAENEKYEGQQLLADLVMN---SEEKVTICVTGPLSNVAWCIDKYGEKFTSKVEECVIMGGAVDVRGNVFLPSTDGTAEWNIYWDPASAKTVFGCPGLRRIMFSLDSTNTVPVRSPYVQRFGEQTNFLLSILVGTMWAMCTHCELLRDG--YYAWDALTAAYV--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132899 for 2210 contacts (-60.1/contact) +
2D Compatibility (PS) -25933 + (NN) -8571 + (LL) 3576
1D Compatibility (HY) -21600 + (ID) 4550
Total energy: -189977.0 ( -85.96 by residue)
QMean score : 0.508
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