Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLVTATTLTAGIGTALVGQAHHADAAENYTNYNNYNYNTTQTTTTTTTTTTTSSISHSGNLYTAGQCTWYVYDKVGGEIGSTWGNANNWAAAAQGAGFTVNHTPSKGAILQSSE------------GPFGHVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGNYNYIHI |
2IM9 Chain:A ((262-310)) | -------------------------------------------------------------------------------------------------------SQIPNGAVIEIIRPNWDLRQQIGTELDISHLGFAIWIN--NELFFRQAS-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3868 for 159 contacts (-24.3/contact) +
2D Compatibility (PS) -4181 + (NN) -4694 + (LL) 5656
1D Compatibility (HY) -2400 + (ID) 200
Total energy: -9687.0 ( -60.92 by residue)
QMean score : 0.161
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