Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKSINHICFSVRNLNDSIHFYRDILLGKLLLTGKKTAYFELAGLWIALNEEKDIPRNEIHFSYTHIAFTIDDSEFKYWHQRLKDNNVNILEGRVRDIRDRQSIYFTDPDGHKLELHTGTLENRLNYYKEAKPHMTFYK
4NB1 Chain:B ((8-145))
MLKSINHICFSVRNLNDSIHFYRDILLGKLLLTGKKTAYFELAGLWIALNEEK----------YTHIAFTIDDSEFKYWHQRLKDNNVNILEGRVRDIRDRQSIYFTDPDGHKLELHTGTLENRLNYY-----HMTFY-
General information:
TITO was launched using:
RESULT:
Template:
4NB1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65170 for 776 contacts (-84.0/contact) +
2D Compatibility (PS) -13082 + (NN) -2271 + (LL) 764
1D Compatibility (HY) -19600 + (ID) 6150
Total energy: -105509.0 ( -135.97 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_4NB1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NB1-query.scw
PDB file :
Tito_Scwrl_4NB1.pdb
: