Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDFNNNTLTIQATRSAKY----KSEQLILDERNFESLMRQFDF-EAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS
3W1Z Chain:A ((34-143))
--------------------------------ELSPSIDVHEGKDTVSVDVELPGVKKEDVQVHYDSGKLTISGEVVNERKNESTEGNQRWSERRFGSFSRTITIPAKIDADRIEANFSNGLLTVTLPKVEKSQT---KKQIAIK
General information:
TITO was launched using:
RESULT:
Template:
3W1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46232 for 595 contacts (-77.7/contact) +
2D Compatibility (PS) -11255 + (NN) -931 + (LL) 1060
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -65408.0 ( -109.93 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_3W1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W1Z-query.scw
PDB file :
Tito_Scwrl_3W1Z.pdb
: