Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLFAQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYAYVTRHRLAVD-RKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK |
2QK7 Chain:A ((11-278)) | ---------------------------------------AEIIKRTQDITSKRLAICQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDL-----IKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTP--QVSAYDQYLFAQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHEKGKGDKSEFEITYGRNMDATYAYVT---RLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSIT-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -58354 for 2075 contacts (-28.1/contact) +
2D Compatibility (PS) -27497 + (NN) -10879 + (LL) 3124
1D Compatibility (HY) -31600 + (ID) 12600
Total energy: -137806.0 ( -66.41 by residue)
QMean score : 0.350
|
|
|