Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTKKLYFLSISIIILVAISIAIYITLNSNTKTRLTNDSQQQIDKIIEHDLQKGHIPGASILIVKNGKVFLNKGYGYQDVDKKVKASPTTKYEIASNTKAFTGLAILKLAQEGRLNLNDDVSKHVPHFKMNYNGQNETITIKQLLAQTSGIPSDITSE---DAVTNKNNRL----NDVTRAIMGDELH---HKPGEEFEYSNMNYDLLGLIIQNVTKQSYTKYITNSWLKPLHMTHTS-FKQTNNKSKHDAIGYELQGSTPVVSKPEFNLWDTPSAYMMTSTEDLEHWIKFQLNPPDKYKSLVQQSH--KNLSSTIGEP----NANAYASGWFTNND---EHLVFHSGTLDNFSSFILLNPKQNYGIVVLANLNSEYVPKLVEHLNTQIVNHKRYSTVASILNQYKDQFNIVTVLMTTLILLAFIFSAYRAWQMRHGQILLRRSKRIAVLSWLTLCLCIAIALILYALPYLILGSNNWSFVLTWLPIEIKLALITTLIALFSTLIVILLFLHTKITKT |
2QMI Chain:H ((5-337)) | -----------------------------------------KLESFIVEKMAERKVPGISISIIKDGDVVYAKGFGYRNVEARLPSTPETIYGIGSITKSFTALAIMKLVEEGGLSLDDPVEKFV-NIKLRPFG--EPVTVHHLLTHSSGIPSLGYAEAFIDGMVGGDNWLPVSTPEETIAFARDMEKWAVAKPGERFFYLNTGYVLLGKIIEKVSGVSYEEYIKKKILEPLGMNRSYFFKEEVEKDKDVAMGYILDKEGRLVPQP-FPYGITADGGLLSSVLDLAKYLKMYI---ERDESIVSKEYIEKMETSYIKVPWEIFGGEGYGYGLIIYPNFLGEKLVGHSGSVGMYTGYIGYIPEKKIGVAVLEN-SSGYPPSYI---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80591 for 2694 contacts (-29.9/contact) +
2D Compatibility (PS) -33446 + (NN) -14523 + (LL) 18576
1D Compatibility (HY) -28000 + (ID) 5750
Total energy: -143734.0 ( -53.35 by residue)
QMean score : 0.451
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