Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNYTVKIKNSAKSDLRKI---KHSYLKKSFLEIVETLKNDPYKITQSFEKLEPKYLERYSRRINHQHRVVYTVDDRNKEVLILSAWSHYD
3OEI Chain:C ((12-96))
--VRSVNFDPDAWEDFLFWLAADRK-TARRITRLIGEIQRDPFSGIGKPEPLQGELSGYWSRRIDDEHRLVYRAGDDE--VTMLKARYHY-
General information:
TITO was launched using:
RESULT:
Template:
3OEI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31033 for 556 contacts (-55.8/contact) +
2D Compatibility (PS) -8891 + (NN) -3983 + (LL) 364
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -48993.0 ( -88.12 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_3OEI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OEI-query.scw
PDB file :
Tito_Scwrl_3OEI.pdb
: