Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTF-GKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSPVDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLIAANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGDTELAVWSQANVAGISVYDTLKEQTGSEAKAEEIYVNTRDAAYEIIQAKGSTYYGIALALMRISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFDKSVKILEDTFDSIKYLLED
3H3J Chain:B ((4-308))---FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGARQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQIIGEHGDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQAKGATYYGVAMGLARITEAIFRNEDAVLTVSALLEGEY-EEEDVYIGVPAVINRNGIRNVVEIPLNDEEQSKFAHSAKTLKD-----------


General information:
TITO was launched using:
RESULT:

Template: 3H3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -204579 for 2691 contacts (-76.0/contact) +
2D Compatibility (PS) -33293 + (NN) -13397 + (LL) 972
1D Compatibility (HY) -34000 + (ID) 9100
Total energy: -293397.0 ( -109.03 by residue)
QMean score : 0.683

(partial model without unconserved sides chains):
PDB file : Tito_3H3J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H3J-query.scw
PDB file : Tito_Scwrl_3H3J.pdb: