Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQASEQSNDTTQSSKNNASADSEKNNMIETPQLNTTANDTSDISANTNSANVDSTTKPMSTQTSNTTTTEPASTNETPQPTAIKNQATAAKMQDQTVPQEANSQVDNKTTNDANSIATNSELKNSQTLDLPQSSPQTISNAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDKVTASNFK-LEK-----TTFDPNQSGNTFMAANFTVTDKVKSGDYFTAKLPDSLTGNGDVDYSNSNNTMPIADIKSTNGDVVAKATYDILTKTYTFVFTDYVNNKENINGQFSLPLFTDRAKAPK-SGTYDANINIADEMFNNKITYNYSSPIAGIDKPNGANISSQIIGVDTASGQNTYKQTVFVNPKQRVLGNTWVYIKGYQDKIEESSGK-VSATDTKLRIFEVNDTSKLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIKFGDIT-KTYVVLVEGHYDNTGKNLKTQVIQENVDPVTNRDYSIFGWNNENVVRYGGGSADGDSAVNPKDPTPGPPVDPEPSPDPEPEPTPDPEPSPDPEPEPSPDPDPDSDSDSDSGSDSDSGSDSDSESDSDSDSDSDSDSDSDSESDSDSESDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSESDSDSESDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKVSKQHKTDALPETGDKSENTNATLFGAMMALLGSLLLFRKRKQDHKEKA |
| 3IRP Chain:X ((3-267)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSGRNVNHLVFANTSYEILGGGKKYNQVFMTMDGKLKIKIDYTVDDSVVEGDYFTVDFGKYIHPGTSRK------PYRVNNIHDANGRTIAIGSYDSATNTAKYTFTNYVDIYNNVRGSFSLLSWPFKELVTTDKQSVPVGITVAGEDYTQNVIFNYGNRTV----PVISDINY-L-------TKDFAEFTTYINQNRAFNTGSKVRLSGQ-------GFKFTSPD--EIEVYKVLNNSQFRDSFSPD--YANLTQVR-NPKIIIN--SDGSATVDLGDIGTLGYIIRSKPNTLPDF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78195 for 1924 contacts (-40.6/contact) +
2D Compatibility (PS) -28188 + (NN) -13081 + (LL) 2344
1D Compatibility (HY) -11600 + (ID) 3050
Total energy: -131770.0 ( -68.49 by residue)
QMean score : 0.444
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