Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTKQSQDFLEKLRVELLFRG-KTEAEVEELLEELEDHLTMAEKNNEDTSSIINTPIKSMADQLSPEISLTTGLYKYITLYFSFILAVIIIPRFLDLGTFDVTIAFLLYIASIVILGVVIGMLILRNTLVRFGDQKITYVINVTYGIVVFLWMIFGGLIIKKYPIYSFFELSDKQSFIVGLVLLIALIVICILIKQKIYALIVLVISLPSLIARIAAIFSKEPDTFNLVSVSILIILNIAFIIYTFVNFRKLKKED |
2O4T Chain:A ((9-77)) | KLPKDYQIVYKEIQKYLFKVGPVELNEGIGLLSEILGFFEEGAAAGKGVLDVTGTDVAAFCDALIGDSK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18359 for 413 contacts (-44.5/contact) +
2D Compatibility (PS) -7935 + (NN) -7512 + (LL) 19836
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -17370.0 ( -42.06 by residue)
QMean score : 0.829
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