Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYSAIPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATS-IIFNSFHQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLHFHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRS--DYDVNLLIQTIKDFKERYHNTEVILEPGEAIGWQCGFLIASVIDIVQ-NDQEIAILDASFSAHMPDCLEMPYRPSILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGS-FSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKIDS-QGFKILKS-FSYEDYKNRN |
| 2YXX Chain:A ((8-382)) | ---AEIHGTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFGMDVVTKGELLAAKLA--GV-PSHTVVWNGNGKSRDQMEHFLREDVRIVNVDSFEEMEIWRELNP-----------EGVEYFIRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFMERFRSMNIRGLHVHIGSQITRVEPFVEAFSKVVRASERY--GFEEINIGGGWGINYSGEELDLSSYREKVVPDLKR--FKRVIVEIGRYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGMNVLIRPALYSAYHRIFVLG--------------KQGKEMRADVVGPLCESGDVIAYDRELP-EVEPGDIIAVENAGAYGYTMSNNYNSTTRPAEVLVRENGRISLIRRRETEMDIFKDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182796 for 3095 contacts (-59.1/contact) +
2D Compatibility (PS) -38591 + (NN) -8889 + (LL) 2360
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -244416.0 ( -78.97 by residue)
QMean score : 0.392
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