Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKFLFKQKFCESLPKSFSKTLLALSLGLILL--GVFIPF-PKVPKHQSVPLALHFTEHYARFIPTILSVAIPLIQRDAVGLFQVANASIATTFLTHATKRALNHVTINDQRLG-ERPYGGNFNMPSGHSSMVGLAVAFLMRRYSVKKYLWLLPLIPLTMLARIYLDMHTIGAVLAGLGTGMLCVGLFTSPKNLN
1G13 Chain:A ((1-162))
---SSFSWDNCDEGKDPAVIRSLTLEPDPIIVPGNVTLSVMGSTSVPLSSPLKVDLVLEKEV-----AGLWIKIPCTDYIGSCTFEH---------------------FCDVLDMLIPTGEPCPEPL-RTYGLPCHCPFKEGTYSLPKSEFVVPDLELPSWLT--TGNYRIESVLSSSGKRLGCIKIAASLKGI-
General information:
TITO was launched using:
RESULT:
Template:
1G13.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69528 for 1026 contacts (-67.8/contact) +
2D Compatibility (PS) -16422 + (NN) 5380 + (LL) 2896
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -83924.0 ( -81.80 by residue)
QMean score : 0.027
(partial model without unconserved sides chains):
PDB file :
Tito_1G13.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G13-query.scw
PDB file :
Tito_Scwrl_1G13.pdb
: