Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSLFHLKFLKPLSCLQAGLLYSLIFGVLYHFPLFAYVYKESNQVSFIAMIIIVLFCVNGALFLALGLISAYLMRWSAIVFSWLNSVAFYFISAYKVFLNKSMMGNVLNTNTHEVLGFLSVKLFVFIVVFGVLPGYVIYKIPLKNSSKKAPFLAILALVFIFIASAFMNAKNWLWFDKHAKFIGGLILPFAYSVNAFRVSALKFFAPTIKPLPLFSPNHSHSFVVLVIGESARKSNYALYGYEKPTTPRLSKRLENHELTLFNATSC-ATYTTASLECILDSSFKNSLG------AYENLPTY-------LTKAGV---KVFWYSANDGEKNVKVTSYLK-NYELIQ-KCPNC--EAIAPYDESLLYNLPNLLKER-SNENILLILHLAGSHGPNYDNKVPLNFRVFKPYCSSADLSSCSKESLINAYDNTIFYNDYLLDKIISMLENAK--QPALMIYLSDHGESLGEGAYYLHGIPKSIAPKEQYEIPFILYANDLFKEKHSIIQTQTPINQNTIFHSVLGVFEDFKTPSAVYRPSLDLLKHKKE |
| 2GSO Chain:A ((5-226)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPHALLLISIDGLRADMLDR-----GITPNLSHLA-REGVRARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVHNSMRDPTLGGFWLSKSEAVGDARWWGGEPVWVGVENTGQHAATWSWPGSEAAIKGVRPSQWRHYQKGVRLDTRVDAVRGWLATDGAQRNRLVTLYFEHVDEA--GHDHG---------------------PESRQYADAVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVAPGHAISVEDIAPPQIATAITDGQVIGFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQYGSHPRIPSLVCQMHEG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GSO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93207 for 1487 contacts (-62.7/contact) +
2D Compatibility (PS) -20588 + (NN) -2926 + (LL) 20996
1D Compatibility (HY) -1200 + (ID) 1150
Total energy: -98075.0 ( -65.95 by residue)
QMean score : 0.300
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