Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKFLSLTLGSLLVSALSAEDNGFFVSAGYQIGESAQMVKNTKGIQDLSDSYERLNNLLTNYSVLNALIRQSADPNAINNARGNLNASAKNLINDKKNSPAYQAVLLALNAAAGLWQVMSYAISPCGPGKDTSKNGGVQTFHNTPSNQWGGTT-----ITCGTTGYEPGPYSILSTENY-AKINKAYQIIQKAFGSSGKDIPALSDTNTELKFTINKNNGNTNTNNNGEEIVTKNNAQVLLEQASTIITTLNSACPWINNGGAGGASSGSLWEGIYLKGDGSACGIFKNEISAIQDMIKNAAIAVEQSKIVAANAQNQRNLDTGK---------TFNPYKD--ANFAQSMFANAKAQAEILNRAQAVVKDFERIPAEFVKD---SLGVCHEVQNGHLRGTPSGTVTDNTWGAGCAYVGETVTNLKDSIAHF----GDQAERIHNARNLAYTLANFSSQ---YQKLGEHYDSITAAIS-----SLPDAQSLQNVVSKKTNPNSPQGIQDNYYIDSNIHSQVQSRSQELGSNPFRRAGLIAASTTNNGAMNGIGFQVGYKQFFGKNKRWG----ARYYGFVDY-NHTYNKSQFFNASSDVWTYGVGSDLLVNFINDKATKHNKISFGAFGGIALAGTSWLNSQYVNLANVNNYYKAKINTANFQFLFNLGLRMNLARKKHRATDNAAQHGIELGTKIPTINTNYYSLLGTTLQYRRLYSVYLNYVFAY |
| 4Q6O Chain:A ((21-437)) | --------------------------------------------------------------------------------------------------------------------------------------------MIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVL-----NKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPN----LLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAIEGLLNQLNIPFKRDFDLNPNSVHALIN-----------DKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESN-AYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDN---------------IRANVIGFSVSNENKPNEAGYTIKFKDF---QKRFSLDKQERIYRIEFYKNNAFSGMILVKFV----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 30833 for 3032 contacts (10.2/contact) +
2D Compatibility (PS) -40347 + (NN) -6490 + (LL) 16552
1D Compatibility (HY) -12800 + (ID) 3000
Total energy: -15252.0 ( -5.03 by residue)
QMean score : 0.108
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