Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILFGISDTQECYNAIKFAVKLAHSLKEVRFTLLHVSMEVFIYS--E-SGMMD----YGQTEALEEEKAKALLKQFEDAFKKENIECESVLKSGDLIDVVLDMAKDYDLLLIGASESNL-LYR-LFISHQNSLVEQSSIPVVIAK
3AB8 Chain:A ((1-148))
MRILLATDGSPQARGAEALAEWLAYKL-SAPLTVLFVVDTRLARIPELL----PVPVLRTELERALALRGEAVLERVRQSALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVLLAP
General information:
TITO was launched using:
RESULT:
Template:
3AB8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110351 for 1044 contacts (-105.7/contact) +
2D Compatibility (PS) -14442 + (NN) -7695 + (LL) 280
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: -137308.0 ( -131.52 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_3AB8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AB8-query.scw
PDB file :
Tito_Scwrl_3AB8.pdb
: