Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAP--SEYVYTLRDLDKDALIRPMASIG-ANQ----ATEARLLVGQKGYDRYAQIS---QKT-QKNGVISNICYQMLGLGVGGN--------GF-IETKFIKRFLN-QQEPYYGDIGVRLEE------------------RHKRLVVAQFDPFFPK--NPFLKNDEILAINDYKIHSLAEFEWVVSNLSYQSLAKVKIKRNHQIKEVTLKVNKRYGGFLLKDTFLERYGIALDERFIITKIGAHLPKGLDFLKLGDRILWVNHKSVSFNPKALREALSTPKIELLVWRQGFEFYIKVR |
| 1LCY Chain:A ((78-321)) | -------------------------------------------------------LSGDTYEAVVTAVDPVADIATLRIQTKEPLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRP---NVEYIQTDAAIDFGNA--GGPLVNLDGEVIGVNTMKVTAGISFAIPSDRLREFLHR------RYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVR---TQSQLAVQIRRGRETLTLYVTPEVTE----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42977 for 1277 contacts (-33.7/contact) +
2D Compatibility (PS) -18714 + (NN) 2998 + (LL) 11668
1D Compatibility (HY) -3600 + (ID) 1600
Total energy: -52225.0 ( -40.90 by residue)
QMean score : 0.187
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