Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVSRFLNAIDPFNLGVLLSRFQIKNGCIYGVCSYKVSKFTPGYEESKARVLNALNILSKHQIWQSNQESVTKVKGTFVFILENDLHLDENSFYKKLLNLIIDNDFFNRSHLVTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNPSR
3PT6 Chain:B ((895-946))
-------------------------------------------------------------------------------------------------------------------------HPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPPPLAKAIGLEIKLCLLS------
General information:
TITO was launched using:
RESULT:
Template:
3PT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10138 for 265 contacts (-38.3/contact) +
2D Compatibility (PS) -5503 + (NN) -2756 + (LL) 8000
1D Compatibility (HY) -1200 + (ID) 1400
Total energy: -12997.0 ( -49.05 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_3PT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PT6-query.scw
PDB file :
Tito_Scwrl_3PT6.pdb
: