Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNLLIQAENAIALLFLLNDKNLKGKIDLIYIDPPFATNNHFTITNGRATTISNSKNGDIAYSDKVVGMDFMEFLKQRLVLLKELLSEQGSIYVHTDYKIGH-----------YVKVMLDEIFGIQNFRNEITRIKCNPKNFK-------RIGYGNIKDMILFYSKGKNPIFNEPKI--PYTPQDLEKRFPKIDKDKRRYTTVPIHAPGEVESGECSKAFKGMLPPKGRHWRTDIATLERWDKEGLIEYSNNNNPRKKIYALEQVGKRVQDIWEFKD-------------PQYPSYPTEKNAQLLDLIIKTSSNKDSIVLDCFCGSGTTLKSAFLLQRKFIGIDNSDLAIQACKNKLETIT---------KDLFVSQNFYDFLVF |
| 1BOO Chain:A ((14-320)) | -NGSMYIGDSLELLESF-----PEESISLVMTSPPFALQRKKEYGN-------------------LEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEV-GF-FLAEDFYWFNPSKLPSPIEWVNKRKIRVKDAVNTVWWFSKTEWPKSDITKVLA---------------------------------------------------------------------------------------SIPPNLLQISNSESNGQYLANCKLMGIKAHPARFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNISEEKITDIYNRILNGESLDLNSI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98538 for 1729 contacts (-57.0/contact) +
2D Compatibility (PS) -24705 + (NN) -19111 + (LL) 4928
1D Compatibility (HY) -10400 + (ID) 1950
Total energy: -149776.0 ( -86.63 by residue)
QMean score : 0.424
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