Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MGHVVLSTPIVTMFVVYSLLMLYIGFYFYKQNETTEDYFLGDRSMGPVI---SALSAGASDMSGWLLMGLPGALYVGGLINSHIAIGLSLGALINWVFV---------AKRLRIYTSVIANSITISDYFETRFSDDKHILRLISAFVILIFFI----FYISSGLVSGAKLFEATF-------------GIQYTYALSIGTLIIVSYTFLGGYKAVCWTDLIQGL---LMMSALIVVPIVMIIHLGGIGEGIKI-IREIKPENLSFLQGSSVVAIISSLAWGLGYFGQPHILVRFMSIRSIRDVPKATTIGISWMVISLIGACVMGLLGVAYVHKFDLSLEDPEKIFIVMSQLLFNPWITGILLSAILA-----AVMSTASSQLLVSSSTIAEDFYATI--FNKNAPQKLVMTISRLSVLGVACIAFFISTDKNASILSIVSYAWAGFGASFGSVILFSLFWSRMTRIGAIAGMLSGASTVILYDKFGKSFLDIYEIVPGFIVASVAIV-----AFSLFSSVRSGTKEAFETMLKEIESLKH---------- |
| 1NIR Chain:A ((6-543)) | AAEQYQGAASAVDPAHVVRT---NGAPDMSESEFNEAKQIYFQRCAGCHGVLRKGATGKPLTPDITQQRGQQYLEALITYGTPLGMPNWG--SSGELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPKK-QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE-------HPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD---RRLSALVDV-GKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG--SLFIKTHPK-SSHLYVDTTFNPDARISQSVAVFDLKNLD-----AKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTGKFNVYNTQHDVY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -402366 for 3803 contacts (-105.8/contact) +
2D Compatibility (PS) -49720 + (NN) -3251 + (LL) 2060
1D Compatibility (HY) 9200 + (ID) 3250
Total energy: -447327.0 ( -117.62 by residue)
QMean score : 0.149
|
|
|