Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVQMDTEEVREFVGHLERFKELLNEEVNSLNGHFHNL-ESWQDARRDKFSEVLDNLKGTFNEFNEAAQEQIAWLKERIRVLEEDY
3GWK Chain:C ((3-84))
MSQIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTD
General information:
TITO was launched using:
RESULT:
Template:
3GWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6646 for 445 contacts (-14.9/contact) +
2D Compatibility (PS) -8430 + (NN) -4084 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -23160.0 ( -52.04 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_3GWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWK-query.scw
PDB file :
Tito_Scwrl_3GWK.pdb
: