Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIFLGMALAFSVSMAEKSGAFLGGGFQYSNLENQNTTRTPSANNNTPINTSMFGNNQAAPAQETPSVINTNNYGQMYGVDAMAGYKWFFGKTKRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYKRNFSIYFNYMINL |
| 2F1V Chain:A ((2-161)) | -----------------EAGEFFMRAGSATVRPTEG-----------------------------------GFSVTNNTQLGLTFTY--MAT--DNIGVELLAATPFR-HKIGT---RA----TGDIATVHHLPPTLMAQWYFGDAS---SKFRPYVGAGINYTTFFDNGFNDHG-K------EAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12311 for 1068 contacts (11.5/contact) +
2D Compatibility (PS) -15288 + (NN) -2001 + (LL) 3744
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -3634.0 ( -3.40 by residue)
QMean score : 0.085
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