Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNVLKVDMKKTLFEENELLKESAYTQPAIYLVSYIAYQLLN---KQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRTKNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKSKAVELLSLQLTQPVRYQDCVKSNNDRVDVFFELGCGSVLKGLNKRLSNKPTISVGDNKGLDEAIEFLEEYV
2H1Y Chain:A ((1-309))
MQYALLFPGQGSQCIGMGKSFYEGHTLAKELFERASNALKVDMKKTLFEENELLKESAYTQPAIYLVSYIAYQLLNKQANG---GLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRTKNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKAKAVELLSLQLTQPVRYQDCVKSNNDRVDIFFELGCGSVLKGLNKRLSNKPTISVGDNKGLDEAIEFLEEYV
General information:
TITO was launched using:
RESULT:
Template:
2H1Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -225802 for 2776 contacts (-81.3/contact) +
2D Compatibility (PS) -33039 + (NN) -14667 + (LL) -108
1D Compatibility (HY) -46000 + (ID) 15000
Total energy: -334616.0 ( -120.54 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_2H1Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H1Y-query.scw
PDB file :
Tito_Scwrl_2H1Y.pdb
: