Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDGSNRKMQLELFPIDLPYASAKEIAIAKMQHLPKLVRDALKYMGFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQTFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIG--CQLGIDYQKKAVEYMAKR-----VPNMELFVFCEDLKFTQNLDLGY---PFMDMT------------TRDKDEEAYWDMLLMQSCKHGIIAN-STYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA |
2DE0 Chain:X ((330-482)) | ---------------------------------------------------------------------------------------------------------------------------QFVKYLIRPQPWLEKEI--------EEATKKLGFKHPVIGVHVRR-----TEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DE0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71769 for 857 contacts (-83.7/contact) +
2D Compatibility (PS) -13165 + (NN) -1531 + (LL) 9552
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -80513.0 ( -93.95 by residue)
QMean score : 0.348
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