Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MRKIVLVAIALLISGCASYKITPEHVTSYNNGIQVMTSTQA-----RSKVQLEI---------------AQSKLKGLNESP------LVLYVAAQVLEGKPVVFSRKAISVSINQTNLPVLSLRQVMKSSFDFEGILQSFNISVPTAPIDNINM-------ITPPMFYYGQ-------GSFLAYNGMMYGGMGMYGPGFG--------MMMMDDVEEQ-------EVMQESRQALKILAINYLKKN--------TLNVENKAKGGFVVVD-----TKNLKTPGVVVVKVFLE-DEIHTFKIDISKM------------------ |
| 4LK4 Chain:A ((10-350)) | RIINGSNANSAEWPSIVALVKRGADAYQGQFCGGSFLGGRYVLTAAHCFDSRSAASVDVIIGAYDLNNSSQGERIAAQKIYRHLSYSPSNLLNDIAIVELAQTSSLPAITLAGPA-----TRTSLPALTPLTVAGWGITFTPILQEVDVDLVSQSLCQIVMQHGISSDPNSTNFCAARLTQGDAGGPIVVKTGREQLGIVSWGDEQGTYGVYTNVSYFRDWITKHTNQLSYDQVANLGIRPLGKVSQSFTYTNLDANALTYTGNTFSSLPADFSVLSDGCSTKVTLATGESCSVEVAVDAQHYRQYQYDFELIFSYAGGSKRATSRIQLDT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71121 for 1536 contacts (-46.3/contact) +
2D Compatibility (PS) -24787 + (NN) 2557 + (LL) 544
1D Compatibility (HY) -6800 + (ID) 2350
Total energy: -101957.0 ( -66.38 by residue)
QMean score : 0.103
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