Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIHICCSVDNLYFLKKAKEAFAG-----EKIVGFFYNPNIHPYSEYLLRLEDVKRTCEMLGIELLEGDYEL--EKFLDKAKGKELLGEKSERCFECFDLRLEASALKAFELGEEKFTTTLLTSPKKDPNQLIAKGQHIAQRHNLEFVVFRNDNFEHFKSELDLNLQALARENELYRQNYCGCQFALKIQKESQNRSPFELYSPLKRQILPASIEERTQVFRELDAAKKDANKPFLAQKTIATYRLLNGGVWLSKNSNPLDCCILARSKSKAKVRINDLRWVFSQRLSALVGYSQRDETLFLTLEGLNTLMAKNYDNLKELNLNPLSYEEELSLRALVSGSESINPIIVLEERTEKTLFVEIKSIFQEEKVFYLL |
| 3SDB Chain:A ((368-481)) | -----SGGLDSTHALIVATHAMDREGRPRSDILAFALPG------------NNAIKLARALGVTFSEIDIGDTARLMLHTI---------VTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAGEFGEKVGEVLQSVLDTEITSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKSERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARIWLDQIDREVPKG---------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -17382 for 494 contacts (-35.2/contact) +
2D Compatibility (PS) -9633 + (NN) -5892 + (LL) 7388
1D Compatibility (HY) 1600 + (ID) 800
Total energy: -24719.0 ( -50.04 by residue)
QMean score : 0.506
|
|
|