Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFASVFASLGTRIMFVVLAALLGLGGLFIGFVKVMQKDVLVQLMEHLETGQYKKREKTLAYMTKLLEQGIHKYYKNSDNATARKMALDYFKRINDDKGMIYMVVVDKNGVVLFDPVNPKTVGQSGLSLQSVDGVYYVRGYLEAAKKGGGYTYYKMPKYDGGVPEKKFAYSHYDEVSQMVIAATSYYTDINTENQAIKEGVNKVFNENTTKLFLWILTATIALVVLTLIYAKLRIVKRIDELVLKINAFSRGDKDLRAKIDVGDRNDEISQVGRGINLFVENARLIMEEIKGISTLNKTSMDKLVQITQETQKSMKNSSTTLNSVKNKATDIASMMNASIEQSQGLRKRLIETQGLVKESKDAIGDLFSQITESAHTEEELSSKVEQLSRNADDVKSILDIINDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRNLAGRTQKSLAEINSTIMVIVQEINDVSSQMNLNSQKMERLSDMSKSVQETYEKMSSNLSSVVLDSNQSMDDYAKSGHQIEAMVSDFAEVEKVASKTLADSSDILNITTHVSGTTMNLDKQVNLFKT |
| 3UB8 Chain:B ((14-171)) | -------------------------------------------MEHLETGQYKKREKTLAYMTKILEQGIHEYYKSFDNDTARKMALDYFKRINDDKGMIYMVVVDKNGVVLFDPVNPKTVGQSGLDAQSVDGVYYVRGYLEAAKKGGGYTYYKMPKYDGGVPEKKFAYSHYDEVSQMVIAATSYYTDINTENKAIKEGVN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61199 for 1175 contacts (-52.1/contact) +
2D Compatibility (PS) -17272 + (NN) -7792 + (LL) 32496
1D Compatibility (HY) -21600 + (ID) 7450
Total energy: -82817.0 ( -70.48 by residue)
QMean score : 0.567
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