Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLILAVFFTLTLSVSAKEVKIVFLETSDIHGRLFSYDYA--VGEQKPNNGLTRIATLIKKQRAENKNVVLIDSGDLLQGNSAELFNDEPIHPLVRAENDLKFDIRVLGNHEFNFSKDFLEKNIKGFNGDVVNANIIKIADNKP-FVKPYIIKKIDGVRVAVVGFLVPHVPTWEASTPEHFAGLEFLDAEEALKKTLSELKGKYDILIGAFHLGREDEKGG-------DGIPDLAKKFPQFDIIFAGHEHAVYNTK--VGKVHTIEPGAYGAYLAKGVVVFDTK---TKKKIITTENLPTKDAPEDEELAKKYEYVDKKSKEYANEVVGEVTKTFIDRPDFITGEEKITTMPTAALQETPVIELINKVQKYYAK--ADVSAAALFNFGANLKKGPFKRKDVAYIYKFANTLIGVRITGENLLKYMEWSYKFYNQLQPGDLTISFNENVRGYNFDMFS-GVKYQVDVTKPAGQRIINPTINGKPINPKAVYKLAINNYRFGTLSTTLKLVTDADRYYDSYDALQDNGQIRDLIIKYITEEKNAKVTPELEHNWEIINYDFKNPLLEKLAEKLKEGSVKIPTSKDGRTLNVKSIKESEVE |
3IVE Chain:A ((4-501)) | -------------------AKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSL--TKGKAIIDIMNTMPFDAVTIGNHEFDHGWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTV-SAATRVGIEARDEIKWLQRYIDELKGKVDLTVALIHEGVPARQSSMDVRRALDKDIQTASQVKGLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYKEKPHNFTVKNFELKTIYADEWKPDQQTKQVIDGWNKKLDEVVQQTVAQSPVELK----------------RAYGESASLGNLAADALLAAAGKNTQLALTNSGGIRNEIPAGAITMGGVISTFPFPNELVTMELTGKQLRSLMEHGASLS------------------NGVLQVSKGLEMKYDSSKPVGQRVITLTLNGKPIEDATVYHIATQSFLADGGDGF-TAFTEGKARN-----ITGGYYVYHAVVDYFKAGN--TITDEQLNGMRVKDIK---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169765 for 4374 contacts (-38.8/contact) +
2D Compatibility (PS) -51545 + (NN) -22968 + (LL) 6132
1D Compatibility (HY) -14800 + (ID) 5200
Total energy: -258146.0 ( -59.02 by residue)
QMean score : 0.477
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