Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METIEWNEEQRKAFQDLLREFVALIDAKVQEKKQMGKKPKIPKYASCQNGLNKFLAPWGYACKISLGTGLLSHEPSIAFCRQDILGEGFVNGEKPTPTKGFYLWFAYYWRNDLEKID-----LCIGRSDEEDKKEECQKCLAYDKIIPNRNECYREL |
| 1JJ2 Chain:X ((95-236)) | TELQARGLTEKTPDLS--DEDARLLTQRHRVGKPQFNRQDHHKKKRVSTSWRK---PRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVRVHN---------VDDLEGVDGDTEAVRIASKVGARKRERIEE-EAEDAGIRVLNPTYVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 60182 for 809 contacts (74.4/contact) +
2D Compatibility (PS) -13547 + (NN) 1911 + (LL) 2032
1D Compatibility (HY) 6800 + (ID) 600
Total energy: 56778.0 ( 70.18 by residue)
QMean score : 0.018
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