Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGK-AKPIE-RMEEVIKVETLISTIQNALNN----LT-----------TPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALK--EFDIVKFSLDAIDLKAFERVDKPYSK-DINKILEGILSFSQIYQGQLVAEVLLIKGVNDSANNLKLIADFLKKINTARVDLSTIDRPSSFK-----APKLSEDELLKCSLFFEGLCVSLPKRSTAQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF |
2YX0 Chain:A ((62-304)) | -------KFYGIHSHRCL------QMTPVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKPKVDKKKFEEAWNPTHAAISLSGEPMLYPYMGDLVEEFHK--RGFTTFIVTNGTIPER-LEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLELMRDL-PTRTVVRLTLVKG--ENMHSPEKYAKLILKARPMFVEAKAYM------NRLTINNMPSHQDIREFAEALVKHLPGYHIEDEYEPSRVVLIMRDDVDPQGTGVEGRFIKH----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74446 for 1629 contacts (-45.7/contact) +
2D Compatibility (PS) -22532 + (NN) -8974 + (LL) 3820
1D Compatibility (HY) -6800 + (ID) 1850
Total energy: -110782.0 ( -68.01 by residue)
QMean score : 0.433
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