Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNGNQSGAYGSNTPNMPTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYKHFFKKAPQFGMRYYGFFDFASSYYKYYTYNDYGMRDARKGSQSFMFGYGAGTDVLFNPAIFNRENLHFGFFLGVAIGGTSWGPTNYYFKDLAEEYRGSFHPSNFQVLVNGGIRLGTKHQGFEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF
3ZDY Chain:H ((25-60))--------------------------------------------------------------------------------------------------------------SGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNV


General information:
TITO was launched using:
RESULT:

Template: 3ZDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8596 for 152 contacts (-56.6/contact) +
2D Compatibility (PS) -3695 + (NN) 1210 + (LL) 4236
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -9495.0 ( -62.47 by residue)
QMean score : 0.163

(partial model without unconserved sides chains):
PDB file : Tito_3ZDY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZDY-query.scw
PDB file : Tito_Scwrl_3ZDY.pdb: