Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASFSILSIFKIGVGPSSSHTIGPMEAGARFCGLLKGILEQVERVQITLHGSLALTGKGHLSDEAVLIGLHGIYANELDITTKKALLHEAFENKVLKLANQHHIPFDYAKDLIFDNKP-LARHQNALILKAFNAKNEVLKEETYYSVGGG-FVYTEKELDNLSEEGENESVAYDFSSAKELLELCQKHQKSIAEIVRLRENALKNHPDATMTKIYHAMLECYHNGANSKERYLPGSLKVTRLAPSVKTRLEKHPTSGKDPLALIDYISLYARSIAEENASGGKVVTAPTNGACAVVPSVLSYAKNHLFENLSQKSINDFLLTSAAIGYLYKKNASLSGAEAGCQAEIGVASSMAAGGLAHLCQATTQQVLIASEIAMEHHLGLTCDPVGGLVQIPCIERNVLGAIKAISASKLALEDEYKPKVSLDEVIATMYATGKDMNEKYKETSLGGLAKTLKC |
| 1YGY Chain:A ((331-447)) | -----------------------VRKLGVLAGVLSDE---LPVSLSVQVRGELAAEEVEVLRLSALRGLFSAVIEDAVT---FVNAPA---------LAAERGV------TAEICKASESPNHRSVVDVRAVGADGS-VVTVSGTLYGPQLSQKIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDVRTAIAAAVDAYKLEVVDLS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33093 for 834 contacts (-39.7/contact) +
2D Compatibility (PS) -11798 + (NN) 477 + (LL) 17704
1D Compatibility (HY) 800 + (ID) 650
Total energy: -26560.0 ( -31.85 by residue)
QMean score : 0.245
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