Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKYHSDQEYEEIITDQLGDMQLRENLRSAMDTLRANRKNLLKNRYSEWENLRELGKEVKLKILSRLDEYLELFEKNATQNGFKIHYAKDGDEANEIIYNLAKEKNIKRILKQKSMASEEIGLNHYLKEKGIQAQETDLGELIIQLINEHPVHIVVPAIHKNRKQIGKIFEEKLNAAYEEEPEKLNAIARKHMRKEFESFKMGISGVNFAIANEGAIWLVENEGNGRMSTTACDVHVAICGIEKLVESFDDAAILNNLLAPSAVGVPITCYQNIITGPRKNDDLDGPKETHIILLDNNRSNILADEKYYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSP--QLFGL----------NNYGHIPNLCSLCGRCTEVCPVEIPLAELIRDLRSDKVGEGRGVVKGAKSTQHSGMEKFSMKMFAKMASDGTKWRFQLKMAQFFSPLGKLLAPILPLVKEWASVRTLPNMDTSLHAKVQHLEGVIYE |
| 2WDQ Chain:B ((142-237)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLDGLYECILCACCSTSCPSFWWNPDK-----FIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59457 for 609 contacts (-97.6/contact) +
2D Compatibility (PS) -8870 + (NN) -2620 + (LL) 29040
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -45157.0 ( -74.15 by residue)
QMean score : 0.435
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