Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSFLEKNPFFFTLAFIFVFSIAGLVEILPNFFKSARPIEGLRPYTVLETAGRQIYIQEGCYHCHSQLIRPFQAEVDRYGAYSLSGEYAYDRPFLWGSKRIGPDLHRVGDYRTT-----DWHEKHMLDPKSVVPHS-IMPAYKHLFIKKSDFDTAYAEALTQKKVFGVPYDTENGVKLGNVEEAKKAYLEEAKKITADMKDKRVLEAIERGEVLEIVALIAYLNSLGNSRINANQNAK |
| 3WFD Chain:C ((41-134)) | ----------------------------------------NEAAMSAAVVRGKLVWEQNNCVGCHTLL-----GEG----------------------AYFAPELGNVVGRRGGEEGFNTFLQAWMKIQPLNVPGRRAMPQFH-LSEG--QVDDLAEFLKWSSKIDTNQWPPNKEG-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6883 for 558 contacts (-12.3/contact) +
2D Compatibility (PS) -9376 + (NN) -4726 + (LL) 10204
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -13331.0 ( -23.89 by residue)
QMean score : 0.198
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