Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGLWLVISLVFVGFLWANESYVFNNSKGRLTEKSVAFIEGVSKELYLKTGVRFAIDMTDFEKNPIALANKKERQSYQEGFLK-QLKPPFVVFFFYHDAQKIELVANPKDLLD--TDKIFFEKIAPL----LPTNAKEYTPQRISAMLINGYSVAVDALAEKYHVNITQNFSAPKGVTFVKVVIYILLLTLLGAFLGLYFFKKS |
3PVH Chain:A ((14-150)) | ------------------KETYVVDDAG-VLSRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIVVLITS-QKEGAITGGP-AFIEAVGENILDATVSENLPVLATDE-------KYNEAVYSSAKRLVAAIDGQPDPGGP------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72982 for 971 contacts (-75.2/contact) +
2D Compatibility (PS) -13899 + (NN) -3831 + (LL) 5660
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -87202.0 ( -89.81 by residue)
QMean score : 0.525
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